Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp48Q3V0C5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm9002-201ENSMUST00000178437 499 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm27892-201ENSMUST00000185017 106 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Dupd1-202ENSMUST00000224735 548 ntBASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp48Q3V0C5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp48Q3V0C5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp48Q3V0C5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Usp48Q3V0C5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp48Q3V0C5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Usp48Q3V0C5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Gm5035-201ENSMUST00000215581 927 ntBASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp48Q3V0C5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Gm21854-201ENSMUST00000179901 471 ntBASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp48Q3V0C5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms