Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm3375-201ENSMUST00000203929 796 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1brtQ3UNC9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cks1brtQ3UNC9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm9987-201ENSMUST00000069768 567 ntBASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1brtQ3UNC9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms