Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Gm13464-201ENSMUST00000119418 935 ntBASIC13.22□□□□□ -0.29
MitfQ08874 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.22□□□□□ -0.29
MitfQ08874 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.22□□□□□ -0.29
MitfQ08874 Mir8098-201ENSMUST00000184011 137 ntBASIC13.22□□□□□ -0.29
MitfQ08874 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.22□□□□□ -0.29
MitfQ08874 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.22□□□□□ -0.29
MitfQ08874 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
MitfQ08874 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MitfQ08874 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
MitfQ08874 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MitfQ08874 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
MitfQ08874 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.21□□□□□ -0.29
MitfQ08874 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MitfQ08874 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.21□□□□□ -0.29
MitfQ08874 Gm5682-201ENSMUST00000173402 505 ntBASIC13.21□□□□□ -0.29
MitfQ08874 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.21□□□□□ -0.29
MitfQ08874 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.21□□□□□ -0.29
MitfQ08874 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.21□□□□□ -0.29
MitfQ08874 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MitfQ08874 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MitfQ08874 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MitfQ08874 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
MitfQ08874 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
MitfQ08874 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MitfQ08874 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.2□□□□□ -0.3
MitfQ08874 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.2□□□□□ -0.3
MitfQ08874 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Gm6376-201ENSMUST00000209407 580 ntBASIC13.2□□□□□ -0.3
MitfQ08874 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
MitfQ08874 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MitfQ08874 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MitfQ08874 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MitfQ08874 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MitfQ08874 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MitfQ08874 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MitfQ08874 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms