Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm11524-201ENSMUST00000119349 807 ntBASIC17.75■□□□□ 0.43
Col1a2Q01149 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.75■□□□□ 0.43
Col1a2Q01149 Gm26464-201ENSMUST00000157094 305 ntBASIC17.75■□□□□ 0.43
Col1a2Q01149 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col1a2Q01149 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.75■□□□□ 0.43
Col1a2Q01149 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col1a2Q01149 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm15806-201ENSMUST00000120696 955 ntBASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm2495-201ENSMUST00000191160 466 ntBASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm43094-201ENSMUST00000196549 921 ntBASIC17.74■□□□□ 0.43
Col1a2Q01149 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col1a2Q01149 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col1a2Q01149 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col1a2Q01149 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Gm8584-201ENSMUST00000171982 758 ntBASIC17.73■□□□□ 0.43
Col1a2Q01149 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.73■□□□□ 0.43
Col1a2Q01149 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col1a2Q01149 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.72■□□□□ 0.43
Col1a2Q01149 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm29741-201ENSMUST00000192667 421 ntBASIC17.72■□□□□ 0.43
Col1a2Q01149 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm5035-201ENSMUST00000215581 927 ntBASIC17.72■□□□□ 0.43
Col1a2Q01149 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col1a2Q01149 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.72■□□□□ 0.43
Col1a2Q01149 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.72■□□□□ 0.43
Col1a2Q01149 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col1a2Q01149 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms