Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx3-2P97503 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Gm27321-201ENSMUST00000185021 205 ntBASIC13.51□□□□□ -0.25
Nkx3-2P97503 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx3-2P97503 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.5□□□□□ -0.25
Nkx3-2P97503 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Gm9063-201ENSMUST00000223299 582 ntBASIC13.5□□□□□ -0.25
Nkx3-2P97503 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.5□□□□□ -0.25
Nkx3-2P97503 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx3-2P97503 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm24543-201ENSMUST00000103867 82 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm15653-201ENSMUST00000119247 907 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm27437-201ENSMUST00000183429 107 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm27989-201ENSMUST00000184721 107 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Mir6977-201ENSMUST00000184960 64 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm29310-201ENSMUST00000185468 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21825-201ENSMUST00000185728 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm29109-201ENSMUST00000185895 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21896-201ENSMUST00000186520 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21873-201ENSMUST00000186728 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21794-201ENSMUST00000187056 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21880-201ENSMUST00000187275 696 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms