Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.78■□□□□ 0.44
Smarcc1P97496 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc1P97496 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc1P97496 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Smarcc1P97496 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarcc1P97496 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.77■□□□□ 0.44
Smarcc1P97496 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smarcc1P97496 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarcc1P97496 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.77■□□□□ 0.44
Smarcc1P97496 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc1P97496 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Smarcc1P97496 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Smarcc1P97496 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc1P97496 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Smarcc1P97496 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.77■□□□□ 0.43
Smarcc1P97496 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc1P97496 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.76■□□□□ 0.43
Smarcc1P97496 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.76■□□□□ 0.43
Smarcc1P97496 Gm15376-201ENSMUST00000122258 783 ntBASIC17.76■□□□□ 0.43
Smarcc1P97496 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Smarcc1P97496 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc1P97496 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.75■□□□□ 0.43
Smarcc1P97496 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm29649-201ENSMUST00000185649 419 ntBASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm29127-201ENSMUST00000188304 517 ntBASIC17.75■□□□□ 0.43
Smarcc1P97496 Gm18027-201ENSMUST00000218947 619 ntBASIC17.75■□□□□ 0.43
Smarcc1P97496 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcc1P97496 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc1P97496 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms