Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.83■□□□□ 0.44
Nkx2-3P97334 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nkx2-3P97334 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.83■□□□□ 0.44
Nkx2-3P97334 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nkx2-3P97334 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-3P97334 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.82■□□□□ 0.44
Nkx2-3P97334 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.82■□□□□ 0.44
Nkx2-3P97334 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Gm13226-201ENSMUST00000117838 404 ntBASIC17.82■□□□□ 0.44
Nkx2-3P97334 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-3P97334 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.82■□□□□ 0.44
Nkx2-3P97334 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.82■□□□□ 0.44
Nkx2-3P97334 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-3P97334 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Gm6091-201ENSMUST00000098307 165 ntBASIC17.81■□□□□ 0.44
Nkx2-3P97334 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-3P97334 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm23931-201ENSMUST00000103842 109 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm4984-201ENSMUST00000115987 360 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm12957-201ENSMUST00000117835 377 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.8■□□□□ 0.44
Nkx2-3P97334 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-3P97334 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms