Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43cP86449 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Trim43cP86449 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Trim43cP86449 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim43cP86449 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.53■□□□□ 0.08
Trim43cP86449 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43cP86449 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Trim43cP86449 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim43cP86449 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Trim43cP86449 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim43cP86449 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim43cP86449 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim43cP86449 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim43cP86449 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim43cP86449 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Trim43cP86449 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.52■□□□□ 0.07
Trim43cP86449 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim43cP86449 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.51■□□□□ 0.07
Trim43cP86449 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim43cP86449 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim43cP86449 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trim43cP86449 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trim43cP86449 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.51■□□□□ 0.07
Trim43cP86449 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 AA619741-201ENSMUST00000195095 646 ntBASIC15.51■□□□□ 0.07
Trim43cP86449 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Gm44608-201ENSMUST00000206827 855 ntBASIC15.51■□□□□ 0.07
Trim43cP86449 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim43cP86449 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim43cP86449 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim43cP86449 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim43cP86449 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim43cP86449 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Gm25948-201ENSMUST00000175334 112 ntBASIC15.5■□□□□ 0.07
Trim43cP86449 Dupd1-202ENSMUST00000224735 548 ntBASIC15.5■□□□□ 0.07
Trim43cP86449 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.5■□□□□ 0.07
Trim43cP86449 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim43cP86449 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim43cP86449 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim43cP86449 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms