Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.72□□□□□ -0.37
H3f3aP84244 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.72□□□□□ -0.37
H3f3aP84244 Gm13616-201ENSMUST00000120600 222 ntBASIC12.72□□□□□ -0.37
H3f3aP84244 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.72□□□□□ -0.37
H3f3aP84244 AA619741-201ENSMUST00000195095 646 ntBASIC12.72□□□□□ -0.37
H3f3aP84244 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Gm45453-201ENSMUST00000211758 853 ntBASIC12.72□□□□□ -0.37
H3f3aP84244 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.72□□□□□ -0.37
H3f3aP84244 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H3f3aP84244 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H3f3aP84244 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.71□□□□□ -0.37
H3f3aP84244 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
H3f3aP84244 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.71□□□□□ -0.37
H3f3aP84244 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
H3f3aP84244 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Gm22175-201ENSMUST00000175007 78 ntBASIC12.71□□□□□ -0.37
H3f3aP84244 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.71□□□□□ -0.37
H3f3aP84244 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.71□□□□□ -0.37
H3f3aP84244 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
H3f3aP84244 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.71□□□□□ -0.37
H3f3aP84244 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H3f3aP84244 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
H3f3aP84244 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H3f3aP84244 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
H3f3aP84244 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
H3f3aP84244 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.7□□□□□ -0.38
H3f3aP84244 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.7□□□□□ -0.38
H3f3aP84244 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
H3f3aP84244 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.7□□□□□ -0.38
H3f3aP84244 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Gm25144-201ENSMUST00000179561 110 ntBASIC12.7□□□□□ -0.38
H3f3aP84244 Gm25352-201ENSMUST00000179815 110 ntBASIC12.7□□□□□ -0.38
H3f3aP84244 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H3f3aP84244 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H3f3aP84244 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms