Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcaP82350 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.98□□□□□ -0.49
SgcaP82350 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.98□□□□□ -0.49
SgcaP82350 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcaP82350 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SgcaP82350 Gm27742-201ENSMUST00000184667 60 ntBASIC11.98□□□□□ -0.49
SgcaP82350 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcaP82350 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SgcaP82350 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcaP82350 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcaP82350 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SgcaP82350 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcaP82350 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SgcaP82350 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SgcaP82350 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcaP82350 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.97□□□□□ -0.49
SgcaP82350 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.97□□□□□ -0.49
SgcaP82350 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcaP82350 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SgcaP82350 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.96□□□□□ -0.49
SgcaP82350 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SgcaP82350 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.96□□□□□ -0.49
SgcaP82350 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcaP82350 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SgcaP82350 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.96□□□□□ -0.49
SgcaP82350 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms