Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.23□□□□□ -0.13
Ldb1P70662 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.23□□□□□ -0.13
Ldb1P70662 Gm10275-202ENSMUST00000168697 495 ntBASIC14.23□□□□□ -0.13
Ldb1P70662 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.23□□□□□ -0.13
Ldb1P70662 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.23□□□□□ -0.13
Ldb1P70662 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.23□□□□□ -0.13
Ldb1P70662 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Ldb1P70662 Gm10275-201ENSMUST00000092620 635 ntBASIC14.23□□□□□ -0.13
Ldb1P70662 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ldb1P70662 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ldb1P70662 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ldb1P70662 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Gm2213-201ENSMUST00000197485 688 ntBASIC14.22□□□□□ -0.13
Ldb1P70662 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Ldb1P70662 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Ldb1P70662 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Ldb1P70662 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ldb1P70662 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ldb1P70662 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ldb1P70662 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ldb1P70662 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ldb1P70662 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.21□□□□□ -0.13
Ldb1P70662 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb1P70662 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb1P70662 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.21□□□□□ -0.13
Ldb1P70662 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.21□□□□□ -0.13
Ldb1P70662 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.21□□□□□ -0.13
Ldb1P70662 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ldb1P70662 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Ldb1P70662 Mir6990-201ENSMUST00000183724 91 ntBASIC14.21□□□□□ -0.13
Ldb1P70662 Gm43125-201ENSMUST00000201724 730 ntBASIC14.21□□□□□ -0.13
Ldb1P70662 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.21□□□□□ -0.13
Ldb1P70662 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.21□□□□□ -0.13
Ldb1P70662 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.21□□□□□ -0.13
Ldb1P70662 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ldb1P70662 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ldb1P70662 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ldb1P70662 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms