Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shox2P70390 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Shox2P70390 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.12□□□□□ -0.15
Shox2P70390 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shox2P70390 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shox2P70390 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shox2P70390 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Olfr129-201ENSMUST00000122318 993 ntBASIC14.11□□□□□ -0.15
Shox2P70390 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.11□□□□□ -0.15
Shox2P70390 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Gm17808-201ENSMUST00000200859 894 ntBASIC14.11□□□□□ -0.15
Shox2P70390 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Shox2P70390 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Shox2P70390 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Shox2P70390 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Shox2P70390 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shox2P70390 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.1□□□□□ -0.15
Shox2P70390 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Shox2P70390 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.1□□□□□ -0.15
Shox2P70390 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.1□□□□□ -0.15
Shox2P70390 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Shox2P70390 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.1□□□□□ -0.15
Shox2P70390 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Shox2P70390 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shox2P70390 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shox2P70390 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.09□□□□□ -0.15
Shox2P70390 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shox2P70390 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shox2P70390 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.09□□□□□ -0.15
Shox2P70390 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shox2P70390 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.09□□□□□ -0.15
Shox2P70390 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shox2P70390 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shox2P70390 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms