Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm6P62313 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Lsm6P62313 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm25287-201ENSMUST00000103846 110 ntBASIC12.53□□□□□ -0.4
Lsm6P62313 Gm22918-201ENSMUST00000103855 110 ntBASIC12.53□□□□□ -0.4
Lsm6P62313 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.53□□□□□ -0.4
Lsm6P62313 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm6P62313 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.53□□□□□ -0.4
Lsm6P62313 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.53□□□□□ -0.4
Lsm6P62313 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm6P62313 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm6P62313 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm6P62313 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.53□□□□□ -0.4
Lsm6P62313 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Lsm6P62313 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm6P62313 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Lsm6P62313 Gm4995-201ENSMUST00000117247 432 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm13365-201ENSMUST00000121188 973 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.52□□□□□ -0.41
Lsm6P62313 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm6P62313 Gm29310-201ENSMUST00000185468 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21825-201ENSMUST00000185728 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm29109-201ENSMUST00000185895 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21896-201ENSMUST00000186520 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21873-201ENSMUST00000186728 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21794-201ENSMUST00000187056 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21880-201ENSMUST00000187275 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21826-201ENSMUST00000187451 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21198-201ENSMUST00000188393 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21749-201ENSMUST00000189343 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21901-201ENSMUST00000189568 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm29424-201ENSMUST00000189716 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm28599-201ENSMUST00000189838 694 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21867-201ENSMUST00000189917 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm29269-201ENSMUST00000190087 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21722-201ENSMUST00000190153 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm28423-201ENSMUST00000190701 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21899-201ENSMUST00000190745 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21910-201ENSMUST00000191163 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21849-201ENSMUST00000191571 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm28678-201ENSMUST00000191593 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm20910-201ENSMUST00000193268 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Gm21871-201ENSMUST00000194621 696 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm6P62313 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.52□□□□□ -0.41
Lsm6P62313 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm6P62313 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms