Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm3P62311 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm3P62311 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm3P62311 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsm3P62311 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.01□□□□□ -0.33
Lsm3P62311 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm3P62311 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.01□□□□□ -0.33
Lsm3P62311 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm3P62311 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm3P62311 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13□□□□□ -0.33
Lsm3P62311 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13□□□□□ -0.33
Lsm3P62311 Gm15358-201ENSMUST00000119249 520 ntBASIC13□□□□□ -0.33
Lsm3P62311 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13□□□□□ -0.33
Lsm3P62311 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13□□□□□ -0.33
Lsm3P62311 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm3P62311 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm3P62311 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.99□□□□□ -0.33
Lsm3P62311 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.99□□□□□ -0.33
Lsm3P62311 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.99□□□□□ -0.33
Lsm3P62311 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Gm37055-201ENSMUST00000191866 133 ntBASIC12.99□□□□□ -0.33
Lsm3P62311 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm3P62311 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.99□□□□□ -0.33
Lsm3P62311 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm3P62311 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lsm3P62311 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms