Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm10499-201ENSMUST00000174094 934 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Mir8117-201ENSMUST00000184773 107 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Gm17968-201ENSMUST00000194902 784 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Gm18246-201ENSMUST00000221023 728 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Sec61a1P61620 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.61□□□□□ -0.39
Sec61a1P61620 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a1P61620 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Celf4-206ENSMUST00000224553 1729 ntBASIC12.6□□□□□ -0.39
Sec61a1P61620 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.6□□□□□ -0.39
Sec61a1P61620 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm27397-201ENSMUST00000184997 107 ntBASIC12.6□□□□□ -0.39
Sec61a1P61620 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sec61a1P61620 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.6□□□□□ -0.39
Sec61a1P61620 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a1P61620 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm24513-201ENSMUST00000174964 138 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sec61a1P61620 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm43575-201ENSMUST00000196420 516 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sec61a1P61620 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.59□□□□□ -0.39
Sec61a1P61620 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a1P61620 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a1P61620 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms