Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cks1bP61025 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.21□□□□□ -0.77
Cks1bP61025 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cks1bP61025 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cks1bP61025 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.21□□□□□ -0.77
Cks1bP61025 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.21□□□□□ -0.77
Cks1bP61025 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.21□□□□□ -0.77
Cks1bP61025 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cks1bP61025 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.21□□□□□ -0.78
Cks1bP61025 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.21□□□□□ -0.78
Cks1bP61025 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cks1bP61025 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.21□□□□□ -0.78
Cks1bP61025 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Cks1bP61025 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.21□□□□□ -0.78
Cks1bP61025 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cks1bP61025 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cks1bP61025 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1bP61025 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1bP61025 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1bP61025 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cks1bP61025 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Gm8344-201ENSMUST00000119813 856 ntBASIC10.2□□□□□ -0.78
Cks1bP61025 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Mir6982-201ENSMUST00000184354 68 ntBASIC10.2□□□□□ -0.78
Cks1bP61025 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.2□□□□□ -0.78
Cks1bP61025 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.2□□□□□ -0.78
Cks1bP61025 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cks1bP61025 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms