Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Mir692-1-201ENSMUST00000102263 109 ntBASIC19.15■□□□□ 0.66
Nphp4P59240 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.15■□□□□ 0.66
Nphp4P59240 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.15■□□□□ 0.66
Nphp4P59240 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.15■□□□□ 0.66
Nphp4P59240 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nphp4P59240 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC19.15■□□□□ 0.66
Nphp4P59240 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nphp4P59240 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nphp4P59240 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nphp4P59240 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC19.14■□□□□ 0.65
Nphp4P59240 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC19.14■□□□□ 0.65
Nphp4P59240 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC19.14■□□□□ 0.65
Nphp4P59240 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC19.14■□□□□ 0.65
Nphp4P59240 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Nphp4P59240 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC19.14■□□□□ 0.65
Nphp4P59240 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Nphp4P59240 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nphp4P59240 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC19.13■□□□□ 0.65
Nphp4P59240 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Gm12928-201ENSMUST00000117115 573 ntBASIC19.13■□□□□ 0.65
Nphp4P59240 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nphp4P59240 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC19.13■□□□□ 0.65
Nphp4P59240 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nphp4P59240 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nphp4P59240 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nphp4P59240 Gm5276-201ENSMUST00000196683 1047 ntBASIC19.13■□□□□ 0.65
Nphp4P59240 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nphp4P59240 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nphp4P59240 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.12■□□□□ 0.65
Nphp4P59240 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC19.12■□□□□ 0.65
Nphp4P59240 Gm12390-201ENSMUST00000117897 397 ntBASIC19.12■□□□□ 0.65
Nphp4P59240 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19.12■□□□□ 0.65
Nphp4P59240 Gm24196-201ENSMUST00000179161 110 ntBASIC19.12■□□□□ 0.65
Nphp4P59240 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC19.12■□□□□ 0.65
Nphp4P59240 Gm27839-201ENSMUST00000184242 106 ntBASIC19.12■□□□□ 0.65
Nphp4P59240 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nphp4P59240 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Nphp4P59240 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.11■□□□□ 0.65
Nphp4P59240 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nphp4P59240 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms