Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.94■□□□□ 0.14
Tpm1P58771 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Tpm1P58771 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Tpm1P58771 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tpm1P58771 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.93■□□□□ 0.14
Tpm1P58771 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Tpm1P58771 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.93■□□□□ 0.14
Tpm1P58771 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Gm14042-201ENSMUST00000120139 833 ntBASIC15.93■□□□□ 0.14
Tpm1P58771 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.93■□□□□ 0.14
Tpm1P58771 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.93■□□□□ 0.14
Tpm1P58771 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.93■□□□□ 0.14
Tpm1P58771 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.93■□□□□ 0.14
Tpm1P58771 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Tpm1P58771 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.93■□□□□ 0.14
Tpm1P58771 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tpm1P58771 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Tpm1P58771 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Tpm1P58771 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Tpm1P58771 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44357-201ENSMUST00000195897 142 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm19658-201ENSMUST00000196231 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44367-201ENSMUST00000196836 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44350-201ENSMUST00000197197 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44390-201ENSMUST00000197533 144 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44313-201ENSMUST00000198018 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44486-201ENSMUST00000198508 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44314-201ENSMUST00000199263 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44394-201ENSMUST00000199558 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44484-201ENSMUST00000199873 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44466-201ENSMUST00000200264 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Gm44359-201ENSMUST00000200671 138 ntBASIC15.92■□□□□ 0.14
Tpm1P58771 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Tpm1P58771 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tpm1P58771 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Tpm1P58771 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.91■□□□□ 0.14
Tpm1P58771 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tpm1P58771 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
Tpm1P58771 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.91■□□□□ 0.14
Tpm1P58771 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms