Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Gm28033-201ENSMUST00000184224 96 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.56□□□□□ -0.56
Sssca1P56873 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.56□□□□□ -0.56
Sssca1P56873 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.56□□□□□ -0.56
Sssca1P56873 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sssca1P56873 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Gm9182-201ENSMUST00000217829 639 ntBASIC11.55□□□□□ -0.56
Sssca1P56873 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sssca1P56873 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.55□□□□□ -0.56
Sssca1P56873 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.55□□□□□ -0.56
Sssca1P56873 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sssca1P56873 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sssca1P56873 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Sssca1P56873 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.54□□□□□ -0.56
Sssca1P56873 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Sssca1P56873 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.54□□□□□ -0.56
Sssca1P56873 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Gm34391-201ENSMUST00000203706 907 ntBASIC11.54□□□□□ -0.56
Sssca1P56873 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.54□□□□□ -0.56
Sssca1P56873 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.54□□□□□ -0.56
Sssca1P56873 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sssca1P56873 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sssca1P56873 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms