Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.3□□□□□ -0.12
Lim2P56563 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lim2P56563 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lim2P56563 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Lim2P56563 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lim2P56563 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lim2P56563 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.29□□□□□ -0.12
Lim2P56563 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.29□□□□□ -0.12
Lim2P56563 AA543401-201ENSMUST00000164248 1269 ntBASIC14.29□□□□□ -0.12
Lim2P56563 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lim2P56563 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lim2P56563 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lim2P56563 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lim2P56563 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.29□□□□□ -0.12
Lim2P56563 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Lim2P56563 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lim2P56563 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Lim2P56563 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.28□□□□□ -0.12
Lim2P56563 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Gm9719-201ENSMUST00000162765 543 ntBASIC14.28□□□□□ -0.12
Lim2P56563 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lim2P56563 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Gm27618-201ENSMUST00000183671 60 ntBASIC14.28□□□□□ -0.12
Lim2P56563 Gm28630-201ENSMUST00000187806 498 ntBASIC14.28□□□□□ -0.12
Lim2P56563 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.28□□□□□ -0.12
Lim2P56563 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lim2P56563 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lim2P56563 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lim2P56563 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lim2P56563 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lim2P56563 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
Lim2P56563 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lim2P56563 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lim2P56563 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms