Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh11P55288 Gm27301-201ENSMUST00000184012 127 ntBASIC13.04□□□□□ -0.32
Cdh11P55288 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh11P55288 Gm17968-201ENSMUST00000194902 784 ntBASIC13.04□□□□□ -0.32
Cdh11P55288 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh11P55288 Thap2-203ENSMUST00000218989 527 ntBASIC13.04□□□□□ -0.32
Cdh11P55288 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh11P55288 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh11P55288 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdh11P55288 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh11P55288 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh11P55288 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.03□□□□□ -0.32
Cdh11P55288 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.03□□□□□ -0.32
Cdh11P55288 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Chchd1-203ENSMUST00000224633 557 ntBASIC13.03□□□□□ -0.32
Cdh11P55288 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh11P55288 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdh11P55288 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Cdh11P55288 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh11P55288 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.02□□□□□ -0.32
Cdh11P55288 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh11P55288 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh11P55288 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh11P55288 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh11P55288 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cdh11P55288 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdh11P55288 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdh11P55288 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh11P55288 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cdh11P55288 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Gm45747-201ENSMUST00000212203 999 ntBASIC13.02□□□□□ -0.33
Cdh11P55288 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.02□□□□□ -0.33
Cdh11P55288 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Cdh11P55288 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdh11P55288 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.02□□□□□ -0.33
Cdh11P55288 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh11P55288 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh11P55288 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh11P55288 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh11P55288 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh11P55288 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdh11P55288 Gm15427-201ENSMUST00000117288 531 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms