Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkn2bP55271 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.67□□□□□ -0.22
Cdkn2bP55271 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Gm17968-201ENSMUST00000194902 784 ntBASIC13.67□□□□□ -0.22
Cdkn2bP55271 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.67□□□□□ -0.22
Cdkn2bP55271 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.67□□□□□ -0.22
Cdkn2bP55271 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkn2bP55271 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.66□□□□□ -0.22
Cdkn2bP55271 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm18195-201ENSMUST00000207604 706 ntBASIC13.66□□□□□ -0.22
Cdkn2bP55271 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Cdkn2bP55271 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.66□□□□□ -0.22
Cdkn2bP55271 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkn2bP55271 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Gm27920-201ENSMUST00000183953 96 ntBASIC13.65□□□□□ -0.22
Cdkn2bP55271 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.65□□□□□ -0.22
Cdkn2bP55271 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdkn2bP55271 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms