Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Msh6P54276 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Gm13392-201ENSMUST00000117708 150 ntBASIC17.96■□□□□ 0.47
Msh6P54276 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Msh6P54276 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Gm37714-201ENSMUST00000194742 342 ntBASIC17.96■□□□□ 0.47
Msh6P54276 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.96■□□□□ 0.47
Msh6P54276 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.96■□□□□ 0.47
Msh6P54276 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.96■□□□□ 0.47
Msh6P54276 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.96■□□□□ 0.47
Msh6P54276 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh6P54276 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Msh6P54276 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Msh6P54276 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.95■□□□□ 0.46
Msh6P54276 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Msh6P54276 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Msh6P54276 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.95■□□□□ 0.46
Msh6P54276 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Snora78-201ENSMUST00000158630 128 ntBASIC17.95■□□□□ 0.46
Msh6P54276 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Gm45841-201ENSMUST00000207700 164 ntBASIC17.95■□□□□ 0.46
Msh6P54276 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Msh6P54276 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Msh6P54276 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Msh6P54276 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Msh6P54276 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.95■□□□□ 0.46
Msh6P54276 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.94■□□□□ 0.46
Msh6P54276 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.94■□□□□ 0.46
Msh6P54276 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.94■□□□□ 0.46
Msh6P54276 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Msh6P54276 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.94■□□□□ 0.46
Msh6P54276 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.94■□□□□ 0.46
Msh6P54276 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.94■□□□□ 0.46
Msh6P54276 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Msh6P54276 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Msh6P54276 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.94■□□□□ 0.46
Msh6P54276 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Msh6P54276 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Msh6P54276 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Msh6P54276 Gm12134-201ENSMUST00000122109 520 ntBASIC17.93■□□□□ 0.46
Msh6P54276 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.93■□□□□ 0.46
Msh6P54276 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Msh6P54276 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Msh6P54276 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms