Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox3P53784 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Sox3P53784 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Sox3P53784 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.71□□□□□ -0.21
Sox3P53784 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox3P53784 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.71□□□□□ -0.21
Sox3P53784 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Sox3P53784 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sox3P53784 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox3P53784 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sox3P53784 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.7□□□□□ -0.22
Sox3P53784 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.7□□□□□ -0.22
Sox3P53784 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.7□□□□□ -0.22
Sox3P53784 Gm13015-201ENSMUST00000118674 204 ntBASIC13.7□□□□□ -0.22
Sox3P53784 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Gm12138-201ENSMUST00000122180 951 ntBASIC13.7□□□□□ -0.22
Sox3P53784 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox3P53784 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.7□□□□□ -0.22
Sox3P53784 Gm8602-201ENSMUST00000184045 607 ntBASIC13.7□□□□□ -0.22
Sox3P53784 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Gm6218-201ENSMUST00000219812 628 ntBASIC13.7□□□□□ -0.22
Sox3P53784 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Sox3P53784 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox3P53784 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox3P53784 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox3P53784 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox3P53784 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sox3P53784 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Sox3P53784 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.69□□□□□ -0.22
Sox3P53784 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Grk6-207ENSMUST00000225925 2769 ntBASIC13.69□□□□□ -0.22
Sox3P53784 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.69□□□□□ -0.22
Sox3P53784 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.69□□□□□ -0.22
Sox3P53784 Gm18049-201ENSMUST00000208909 581 ntBASIC13.69□□□□□ -0.22
Sox3P53784 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox3P53784 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox3P53784 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.68□□□□□ -0.22
Sox3P53784 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox3P53784 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sox3P53784 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox3P53784 Gm44344-201ENSMUST00000200287 129 ntBASIC13.68□□□□□ -0.22
Sox3P53784 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox3P53784 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox3P53784 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox3P53784 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms