Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.84□□□□□ -0.51
Nkx2-1P50220 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-1P50220 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-1P50220 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm27459-201ENSMUST00000184860 107 ntBASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.83□□□□□ -0.52
Nkx2-1P50220 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.83□□□□□ -0.52
Nkx2-1P50220 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-1P50220 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.82□□□□□ -0.52
Nkx2-1P50220 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.82□□□□□ -0.52
Nkx2-1P50220 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx2-1P50220 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms