Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Brca1P48754 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.73■□□□□ 0.11
Brca1P48754 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Brca1P48754 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Brca1P48754 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Brca1P48754 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.73■□□□□ 0.11
Brca1P48754 Gm7029-201ENSMUST00000173226 450 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.73■□□□□ 0.11
Brca1P48754 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.73■□□□□ 0.11
Brca1P48754 Gm6334-201ENSMUST00000207083 228 ntBASIC15.73■□□□□ 0.11
Brca1P48754 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.73■□□□□ 0.11
Brca1P48754 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Brca1P48754 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Brca1P48754 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Brca1P48754 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Brca1P48754 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Brca1P48754 Gm12241-201ENSMUST00000118330 726 ntBASIC15.72■□□□□ 0.11
Brca1P48754 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Brca1P48754 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.72■□□□□ 0.11
Brca1P48754 Gm37008-201ENSMUST00000195712 319 ntBASIC15.72■□□□□ 0.11
Brca1P48754 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Brca1P48754 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.72■□□□□ 0.11
Brca1P48754 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.71■□□□□ 0.11
Brca1P48754 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Brca1P48754 Gm42627-201ENSMUST00000197347 224 ntBASIC15.71■□□□□ 0.11
Brca1P48754 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.71■□□□□ 0.11
Brca1P48754 Gm18935-201ENSMUST00000212692 664 ntBASIC15.71■□□□□ 0.11
Brca1P48754 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.71■□□□□ 0.11
Brca1P48754 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
Brca1P48754 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.71■□□□□ 0.11
Brca1P48754 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.71■□□□□ 0.11
Brca1P48754 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Brca1P48754 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Brca1P48754 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Brca1P48754 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Brca1P48754 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.71■□□□□ 0.1
Brca1P48754 Gm26927-201ENSMUST00000182385 965 ntBASIC15.71■□□□□ 0.1
Brca1P48754 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.71■□□□□ 0.1
Brca1P48754 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Brca1P48754 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Brca1P48754 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms