Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm5364-201ENSMUST00000216789 889 ntBASIC12.91□□□□□ -0.34
Rfx3P48381 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfx3P48381 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfx3P48381 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.9□□□□□ -0.34
Rfx3P48381 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfx3P48381 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfx3P48381 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rfx3P48381 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.9□□□□□ -0.34
Rfx3P48381 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Rfx3P48381 Gm9727-201ENSMUST00000161387 555 ntBASIC12.9□□□□□ -0.34
Rfx3P48381 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.9□□□□□ -0.34
Rfx3P48381 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.9□□□□□ -0.34
Rfx3P48381 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.9□□□□□ -0.34
Rfx3P48381 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Rfx3P48381 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfx3P48381 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rfx3P48381 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rfx3P48381 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rfx3P48381 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.89□□□□□ -0.35
Rfx3P48381 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.89□□□□□ -0.35
Rfx3P48381 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rfx3P48381 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.89□□□□□ -0.35
Rfx3P48381 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.89□□□□□ -0.35
Rfx3P48381 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rfx3P48381 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.89□□□□□ -0.35
Rfx3P48381 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfx3P48381 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.89□□□□□ -0.35
Rfx3P48381 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfx3P48381 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms