Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
Vps4bP46467 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps4bP46467 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm10275-202ENSMUST00000168697 495 ntBASIC14.49□□□□□ -0.09
Vps4bP46467 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.49□□□□□ -0.09
Vps4bP46467 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm10275-201ENSMUST00000092620 635 ntBASIC14.49□□□□□ -0.09
Vps4bP46467 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps4bP46467 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps4bP46467 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps4bP46467 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vps4bP46467 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vps4bP46467 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vps4bP46467 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps4bP46467 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Gm15483-201ENSMUST00000120338 456 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Gm11543-201ENSMUST00000120758 370 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.48□□□□□ -0.09
Vps4bP46467 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
Vps4bP46467 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.48□□□□□ -0.09
Vps4bP46467 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Mir8117-201ENSMUST00000184773 107 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.48□□□□□ -0.09
Vps4bP46467 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.48□□□□□ -0.09
Vps4bP46467 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vps4bP46467 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Vps4bP46467 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps4bP46467 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps4bP46467 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps4bP46467 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps4bP46467 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps4bP46467 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps4bP46467 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps4bP46467 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps4bP46467 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms