Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf4P43488 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf4P43488 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf4P43488 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.79□□□□□ -0.2
Tnfsf4P43488 Gm15483-201ENSMUST00000120338 456 ntBASIC13.79□□□□□ -0.2
Tnfsf4P43488 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Gm8584-201ENSMUST00000171982 758 ntBASIC13.79□□□□□ -0.2
Tnfsf4P43488 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf4P43488 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Gm10275-202ENSMUST00000168697 495 ntBASIC13.78□□□□□ -0.2
Tnfsf4P43488 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Gm10275-201ENSMUST00000092620 635 ntBASIC13.78□□□□□ -0.2
Tnfsf4P43488 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf4P43488 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsf4P43488 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsf4P43488 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsf4P43488 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsf4P43488 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Gm14140-201ENSMUST00000119999 995 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Gm17968-201ENSMUST00000194902 784 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfsf4P43488 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.77□□□□□ -0.21
Tnfsf4P43488 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsf4P43488 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms