Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Abca1P41233 AY702102-202ENSMUST00000194651 1173 ntBASIC11.9□□□□□ -0.5
Abca1P41233 Gm9899-201ENSMUST00000065519 555 ntBASIC11.9□□□□□ -0.5
Abca1P41233 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Abca1P41233 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Abca1P41233 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.89□□□□□ -0.51
Abca1P41233 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.89□□□□□ -0.51
Abca1P41233 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Gm11918-201ENSMUST00000121660 179 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.89□□□□□ -0.51
Abca1P41233 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.89□□□□□ -0.51
Abca1P41233 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Abca1P41233 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Abca1P41233 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Abca1P41233 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Abca1P41233 Gm29310-201ENSMUST00000185468 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21825-201ENSMUST00000185728 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm29109-201ENSMUST00000185895 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21896-201ENSMUST00000186520 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21873-201ENSMUST00000186728 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21794-201ENSMUST00000187056 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21880-201ENSMUST00000187275 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21826-201ENSMUST00000187451 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21198-201ENSMUST00000188393 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21749-201ENSMUST00000189343 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21901-201ENSMUST00000189568 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm29424-201ENSMUST00000189716 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm28599-201ENSMUST00000189838 694 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21867-201ENSMUST00000189917 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm29269-201ENSMUST00000190087 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21722-201ENSMUST00000190153 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm28423-201ENSMUST00000190701 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21899-201ENSMUST00000190745 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21910-201ENSMUST00000191163 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm21849-201ENSMUST00000191571 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm28678-201ENSMUST00000191593 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm20910-201ENSMUST00000193268 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.89□□□□□ -0.51
Abca1P41233 Gm21871-201ENSMUST00000194621 696 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm8515-201ENSMUST00000194852 576 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Gm20445-201ENSMUST00000061905 565 ntBASIC11.89□□□□□ -0.51
Abca1P41233 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Abca1P41233 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Abca1P41233 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Abca1P41233 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.88□□□□□ -0.51
Abca1P41233 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.88□□□□□ -0.51
Abca1P41233 Gm6266-201ENSMUST00000203844 806 ntBASIC11.88□□□□□ -0.51
Abca1P41233 Gm6007-201ENSMUST00000208170 823 ntBASIC11.88□□□□□ -0.51
Abca1P41233 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Gm18624-201ENSMUST00000220966 658 ntBASIC11.88□□□□□ -0.51
Abca1P41233 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Abca1P41233 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms