Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm10355-201ENSMUST00000097146 517 ntBASIC12.3□□□□□ -0.44
Slc6a1P31648 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.3□□□□□ -0.44
Slc6a1P31648 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.3□□□□□ -0.44
Slc6a1P31648 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Slc6a1P31648 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Grk6-207ENSMUST00000225925 2769 ntBASIC12.3□□□□□ -0.44
Slc6a1P31648 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Slc6a1P31648 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm10060-201ENSMUST00000212002 111 ntBASIC12.29□□□□□ -0.44
Slc6a1P31648 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm8655-201ENSMUST00000221159 852 ntBASIC12.29□□□□□ -0.44
Slc6a1P31648 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.29□□□□□ -0.44
Slc6a1P31648 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.29□□□□□ -0.44
Slc6a1P31648 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slc6a1P31648 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Slc6a1P31648 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.28□□□□□ -0.44
Slc6a1P31648 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.28□□□□□ -0.44
Slc6a1P31648 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.28□□□□□ -0.44
Slc6a1P31648 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm6296-201ENSMUST00000222599 943 ntBASIC12.28□□□□□ -0.44
Slc6a1P31648 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.28□□□□□ -0.44
Slc6a1P31648 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.28□□□□□ -0.44
Slc6a1P31648 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slc6a1P31648 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms