Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd28P31041 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd28P31041 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.59□□□□□ -0.39
Cd28P31041 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.59□□□□□ -0.39
Cd28P31041 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cd28P31041 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cd28P31041 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.59□□□□□ -0.39
Cd28P31041 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cd28P31041 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cd28P31041 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.59□□□□□ -0.39
Cd28P31041 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cd28P31041 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.58□□□□□ -0.39
Cd28P31041 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.58□□□□□ -0.39
Cd28P31041 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cd28P31041 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.58□□□□□ -0.39
Cd28P31041 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.58□□□□□ -0.4
Cd28P31041 Gm8584-201ENSMUST00000171982 758 ntBASIC12.58□□□□□ -0.4
Cd28P31041 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.58□□□□□ -0.4
Cd28P31041 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cd28P31041 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cd28P31041 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cd28P31041 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Cd28P31041 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cd28P31041 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cd28P31041 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms