Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.92□□□□□ -0.5
Col8a2P25318 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col8a2P25318 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.92□□□□□ -0.5
Col8a2P25318 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Gm14719-201ENSMUST00000121891 340 ntBASIC11.92□□□□□ -0.5
Col8a2P25318 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.92□□□□□ -0.5
Col8a2P25318 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Gm7063-201ENSMUST00000186840 981 ntBASIC11.92□□□□□ -0.5
Col8a2P25318 Gm6218-201ENSMUST00000219812 628 ntBASIC11.92□□□□□ -0.5
Col8a2P25318 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col8a2P25318 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.92□□□□□ -0.5
Col8a2P25318 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.92□□□□□ -0.5
Col8a2P25318 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col8a2P25318 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col8a2P25318 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.91□□□□□ -0.5
Col8a2P25318 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Mir8102-201ENSMUST00000184148 139 ntBASIC11.91□□□□□ -0.5
Col8a2P25318 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.91□□□□□ -0.5
Col8a2P25318 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.91□□□□□ -0.5
Col8a2P25318 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.91□□□□□ -0.5
Col8a2P25318 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.91□□□□□ -0.5
Col8a2P25318 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col8a2P25318 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Syt7-204ENSMUST00000223586 1344 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col8a2P25318 Gm15321-201ENSMUST00000121290 288 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col8a2P25318 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col8a2P25318 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col8a2P25318 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.9□□□□□ -0.5
Col8a2P25318 Gm27437-201ENSMUST00000183429 107 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 Mir6977-201ENSMUST00000184960 64 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.9□□□□□ -0.5
Col8a2P25318 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms