Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf9P20334 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Tnfrsf9P20334 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf9P20334 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf9P20334 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Syt7-205ENSMUST00000224135 1557 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm6973-201ENSMUST00000117080 721 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm27306-201ENSMUST00000183970 107 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf9P20334 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm16215-201ENSMUST00000161990 637 ntBASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Gm44855-201ENSMUST00000205725 362 ntBASIC11.74□□□□□ -0.53
Tnfrsf9P20334 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf9P20334 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms