Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.25□□□□□ -0.13
PdgfaP20033 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.25□□□□□ -0.13
PdgfaP20033 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfaP20033 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
PdgfaP20033 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PdgfaP20033 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.24□□□□□ -0.13
PdgfaP20033 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.24□□□□□ -0.13
PdgfaP20033 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Gm11025-201ENSMUST00000140773 466 ntBASIC14.24□□□□□ -0.13
PdgfaP20033 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PdgfaP20033 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.24□□□□□ -0.13
PdgfaP20033 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.24□□□□□ -0.13
PdgfaP20033 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfaP20033 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PdgfaP20033 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PdgfaP20033 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PdgfaP20033 Gm14722-201ENSMUST00000118943 689 ntBASIC14.23□□□□□ -0.13
PdgfaP20033 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.23□□□□□ -0.13
PdgfaP20033 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.23□□□□□ -0.13
PdgfaP20033 Mir6956-201ENSMUST00000183598 62 ntBASIC14.23□□□□□ -0.13
PdgfaP20033 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.23□□□□□ -0.13
PdgfaP20033 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.23□□□□□ -0.13
PdgfaP20033 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PdgfaP20033 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfaP20033 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PdgfaP20033 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PdgfaP20033 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfaP20033 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.22□□□□□ -0.13
PdgfaP20033 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.22□□□□□ -0.13
PdgfaP20033 Gm44872-201ENSMUST00000207864 420 ntBASIC14.22□□□□□ -0.13
PdgfaP20033 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.22□□□□□ -0.13
PdgfaP20033 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.22□□□□□ -0.13
PdgfaP20033 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PdgfaP20033 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PdgfaP20033 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms