Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC21.17■□□□□ 0.98
NclP09405 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NclP09405 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
NclP09405 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NclP09405 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
NclP09405 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NclP09405 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NclP09405 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NclP09405 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NclP09405 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Gm42612-201ENSMUST00000197986 623 ntBASIC21.16■□□□□ 0.98
NclP09405 Gm43170-201ENSMUST00000199827 612 ntBASIC21.16■□□□□ 0.98
NclP09405 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NclP09405 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC21.16■□□□□ 0.98
NclP09405 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NclP09405 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
NclP09405 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NclP09405 Carlr-201ENSMUST00000181515 2574 ntBASIC21.15■□□□□ 0.98
NclP09405 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC21.15■□□□□ 0.98
NclP09405 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC21.15■□□□□ 0.98
NclP09405 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC21.15■□□□□ 0.98
NclP09405 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC21.15■□□□□ 0.98
NclP09405 Gm21854-201ENSMUST00000179901 471 ntBASIC21.15■□□□□ 0.98
NclP09405 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC21.15■□□□□ 0.98
NclP09405 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NclP09405 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC21.15■□□□□ 0.98
NclP09405 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NclP09405 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NclP09405 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NclP09405 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NclP09405 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
NclP09405 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NclP09405 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
NclP09405 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NclP09405 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC21.14■□□□□ 0.97
NclP09405 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21.14■□□□□ 0.97
NclP09405 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
NclP09405 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NclP09405 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC21.14■□□□□ 0.97
NclP09405 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
NclP09405 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC21.14■□□□□ 0.97
NclP09405 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NclP09405 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NclP09405 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
NclP09405 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NclP09405 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NclP09405 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC21.13■□□□□ 0.97
NclP09405 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NclP09405 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC21.13■□□□□ 0.97
NclP09405 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC21.13■□□□□ 0.97
NclP09405 AC165157.4-201ENSMUST00000220587 139 ntBASIC21.13■□□□□ 0.97
NclP09405 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NclP09405 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NclP09405 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NclP09405 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Ldb3-207ENSMUST00000227819 1499 ntBASIC21.13■□□□□ 0.97
NclP09405 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NclP09405 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms