Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.03□□□□□ -0.16
Hoxa4P06798 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hoxa4P06798 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.03□□□□□ -0.16
Hoxa4P06798 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hoxa4P06798 Gm15393-201ENSMUST00000120499 219 ntBASIC14.03□□□□□ -0.16
Hoxa4P06798 Gm27838-201ENSMUST00000184829 128 ntBASIC14.03□□□□□ -0.16
Hoxa4P06798 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxa4P06798 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxa4P06798 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Hoxa4P06798 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxa4P06798 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxa4P06798 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxa4P06798 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Hoxa4P06798 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxa4P06798 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hoxa4P06798 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxa4P06798 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Gm4804-201ENSMUST00000182234 999 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxa4P06798 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxa4P06798 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.02□□□□□ -0.17
Hoxa4P06798 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxa4P06798 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm4875-201ENSMUST00000118257 786 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm12151-201ENSMUST00000121374 290 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm21470-201ENSMUST00000187680 696 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm10576-201ENSMUST00000191927 825 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm37714-201ENSMUST00000194742 342 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm18027-201ENSMUST00000218947 619 ntBASIC14.01□□□□□ -0.17
Hoxa4P06798 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxa4P06798 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxa4P06798 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms