Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm25144-201ENSMUST00000179561 110 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm25352-201ENSMUST00000179815 110 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm27533-201ENSMUST00000183800 152 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm27989-201ENSMUST00000184721 107 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.99□□□□□ -0.49
Hoxa3P02831 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hoxa3P02831 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hoxa3P02831 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Gm12428-201ENSMUST00000119844 727 ntBASIC11.98□□□□□ -0.49
Hoxa3P02831 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hoxa3P02831 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.98□□□□□ -0.49
Hoxa3P02831 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hoxa3P02831 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.97□□□□□ -0.49
Hoxa3P02831 Olfr286-202ENSMUST00000205305 969 ntBASIC11.97□□□□□ -0.49
Hoxa3P02831 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Gm9063-201ENSMUST00000223299 582 ntBASIC11.97□□□□□ -0.49
Hoxa3P02831 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hoxa3P02831 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hoxa3P02831 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms