Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm9824-201ENSMUST00000178707 561 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 AA619741-201ENSMUST00000195095 646 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm43474-201ENSMUST00000196415 774 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Igh-VJ558P01758 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.33□□□□□ -0.43
Igh-VJ558P01758 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22065-201ENSMUST00000103753 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22066-201ENSMUST00000103761 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24932-201ENSMUST00000103763 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24115-201ENSMUST00000103799 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22190-201ENSMUST00000103827 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22191-201ENSMUST00000103831 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24721-201ENSMUST00000103849 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm28018-201ENSMUST00000103869 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm26399-201ENSMUST00000103937 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24513-201ENSMUST00000174964 138 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25349-201ENSMUST00000177728 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm23616-201ENSMUST00000177797 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25871-201ENSMUST00000177816 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24752-201ENSMUST00000178240 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24496-201ENSMUST00000178287 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25649-201ENSMUST00000178476 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25548-201ENSMUST00000178681 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm23147-201ENSMUST00000178841 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm26095-201ENSMUST00000179270 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22171-201ENSMUST00000179283 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm23936-201ENSMUST00000179354 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm22619-201ENSMUST00000179516 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25255-201ENSMUST00000179579 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24755-201ENSMUST00000179691 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm26506-201ENSMUST00000179692 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm25086-201ENSMUST00000179931 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm23243-201ENSMUST00000180047 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24659-201ENSMUST00000180212 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm24169-201ENSMUST00000180244 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm23689-201ENSMUST00000180354 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm27359-201ENSMUST00000184153 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm27631-201ENSMUST00000184163 466 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm27785-201ENSMUST00000184268 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm27466-201ENSMUST00000184396 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm27703-201ENSMUST00000184836 110 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Gm18766-201ENSMUST00000189811 808 ntBASIC12.33□□□□□ -0.44
Igh-VJ558P01758 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms