Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.65□□□□□ -0.06
Syn1O88935 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Syn1O88935 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.65□□□□□ -0.06
Syn1O88935 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gm38266-201ENSMUST00000194931 421 ntBASIC14.65□□□□□ -0.06
Syn1O88935 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Gm9823-201ENSMUST00000051212 327 ntBASIC14.65□□□□□ -0.06
Syn1O88935 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.65□□□□□ -0.06
Syn1O88935 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syn1O88935 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.65□□□□□ -0.06
Syn1O88935 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.64□□□□□ -0.07
Syn1O88935 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.64□□□□□ -0.07
Syn1O88935 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.64□□□□□ -0.07
Syn1O88935 Gm27516-201ENSMUST00000184237 98 ntBASIC14.64□□□□□ -0.07
Syn1O88935 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.64□□□□□ -0.07
Syn1O88935 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.64□□□□□ -0.07
Syn1O88935 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.64□□□□□ -0.07
Syn1O88935 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.64□□□□□ -0.07
Syn1O88935 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.64□□□□□ -0.07
Syn1O88935 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Syn1O88935 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.64□□□□□ -0.07
Syn1O88935 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Syn1O88935 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Syn1O88935 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 BC001981-202ENSMUST00000191393 1545 ntBASIC14.63□□□□□ -0.07
Syn1O88935 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Gm15808-201ENSMUST00000119046 604 ntBASIC14.63□□□□□ -0.07
Syn1O88935 Mir8109-201ENSMUST00000184375 117 ntBASIC14.63□□□□□ -0.07
Syn1O88935 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.63□□□□□ -0.07
Syn1O88935 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.63□□□□□ -0.07
Syn1O88935 Gm9182-201ENSMUST00000217829 639 ntBASIC14.63□□□□□ -0.07
Syn1O88935 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.63□□□□□ -0.07
Syn1O88935 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Syn1O88935 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Syn1O88935 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms