Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClppO88696 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.97□□□□□ -0.17
ClppO88696 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ClppO88696 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
ClppO88696 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ClppO88696 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.97□□□□□ -0.17
ClppO88696 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.97□□□□□ -0.17
ClppO88696 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.97□□□□□ -0.17
ClppO88696 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Mir8102-201ENSMUST00000184148 139 ntBASIC13.97□□□□□ -0.17
ClppO88696 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.97□□□□□ -0.17
ClppO88696 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.97□□□□□ -0.17
ClppO88696 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ClppO88696 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.97□□□□□ -0.17
ClppO88696 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.97□□□□□ -0.17
ClppO88696 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.97□□□□□ -0.17
ClppO88696 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.97□□□□□ -0.17
ClppO88696 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ClppO88696 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClppO88696 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Gm8410-201ENSMUST00000117225 605 ntBASIC13.96□□□□□ -0.17
ClppO88696 Gm27618-201ENSMUST00000183671 60 ntBASIC13.96□□□□□ -0.17
ClppO88696 Mir7684-201ENSMUST00000183858 60 ntBASIC13.96□□□□□ -0.17
ClppO88696 Mir6977-201ENSMUST00000184960 64 ntBASIC13.96□□□□□ -0.17
ClppO88696 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ClppO88696 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClppO88696 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
ClppO88696 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
ClppO88696 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClppO88696 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
ClppO88696 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
ClppO88696 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.95□□□□□ -0.18
ClppO88696 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.95□□□□□ -0.18
ClppO88696 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.95□□□□□ -0.18
ClppO88696 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.95□□□□□ -0.18
ClppO88696 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.95□□□□□ -0.18
ClppO88696 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ClppO88696 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms