Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.1■□□□□ 0.01
Psmc3O88685 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.1■□□□□ 0.01
Psmc3O88685 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Psmc3O88685 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.1■□□□□ 0.01
Psmc3O88685 Gm8602-201ENSMUST00000184045 607 ntBASIC15.1■□□□□ 0.01
Psmc3O88685 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.1■□□□□ 0.01
Psmc3O88685 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Gm18624-201ENSMUST00000220966 658 ntBASIC15.1■□□□□ 0.01
Psmc3O88685 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Psmc3O88685 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.1■□□□□ 0.01
Psmc3O88685 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Psmc3O88685 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.1■□□□□ 0.01
Psmc3O88685 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Psmc3O88685 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Psmc3O88685 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Psmc3O88685 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.09■□□□□ 0.01
Psmc3O88685 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.09■□□□□ 0.01
Psmc3O88685 AA619741-201ENSMUST00000195095 646 ntBASIC15.09■□□□□ 0.01
Psmc3O88685 Gm6916-202ENSMUST00000205523 195 ntBASIC15.09■□□□□ 0.01
Psmc3O88685 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.09■□□□□ 0.01
Psmc3O88685 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.09■□□□□ 0.01
Psmc3O88685 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.09■□□□□ 0.01
Psmc3O88685 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Psmc3O88685 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Psmc3O88685 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Psmc3O88685 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Psmc3O88685 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Psmc3O88685 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.08■□□□□ 0
Psmc3O88685 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Psmc3O88685 Gm11918-201ENSMUST00000121660 179 ntBASIC15.08■□□□□ 0
Psmc3O88685 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.08■□□□□ 0
Psmc3O88685 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.08■□□□□ 0
Psmc3O88685 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.08■□□□□ 0
Psmc3O88685 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Psmc3O88685 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.08■□□□□ 0
Psmc3O88685 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.08■□□□□ 0
Psmc3O88685 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Psmc3O88685 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Psmc3O88685 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Psmc3O88685 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.07■□□□□ 0
Psmc3O88685 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Psmc3O88685 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Psmc3O88685 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Psmc3O88685 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.07■□□□□ 0
Psmc3O88685 Mir6392-201ENSMUST00000184924 108 ntBASIC15.07■□□□□ 0
Psmc3O88685 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.07■□□□□ 0
Psmc3O88685 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Psmc3O88685 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.07■□□□□ 0
Psmc3O88685 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.07■□□□□ 0
Psmc3O88685 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.07■□□□□ 0
Psmc3O88685 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Psmc3O88685 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms