Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cops4O88544 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Cops4O88544 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Gm9682-201ENSMUST00000197505 556 ntBASIC13.19□□□□□ -0.3
Cops4O88544 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.19□□□□□ -0.3
Cops4O88544 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.19□□□□□ -0.3
Cops4O88544 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.19□□□□□ -0.3
Cops4O88544 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.19□□□□□ -0.3
Cops4O88544 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.19□□□□□ -0.3
Cops4O88544 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.19□□□□□ -0.3
Cops4O88544 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cops4O88544 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.19□□□□□ -0.3
Cops4O88544 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Cops4O88544 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops4O88544 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.18□□□□□ -0.3
Cops4O88544 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Cops4O88544 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cops4O88544 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cops4O88544 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops4O88544 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.18□□□□□ -0.3
Cops4O88544 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops4O88544 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.17□□□□□ -0.3
Cops4O88544 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cops4O88544 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cops4O88544 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cops4O88544 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Cops4O88544 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.17□□□□□ -0.3
Cops4O88544 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.17□□□□□ -0.3
Cops4O88544 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Gm10819-201ENSMUST00000099988 561 ntBASIC13.17□□□□□ -0.3
Cops4O88544 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops4O88544 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.17□□□□□ -0.3
Cops4O88544 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms