Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dnmt3aO88508 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.4□□□□□ -0.1
Dnmt3aO88508 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.39□□□□□ -0.11
Dnmt3aO88508 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Mir449b-201ENSMUST00000104833 80 ntBASIC14.39□□□□□ -0.11
Dnmt3aO88508 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gm19891-201ENSMUST00000189771 303 ntBASIC14.39□□□□□ -0.11
Dnmt3aO88508 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gm18049-201ENSMUST00000208909 581 ntBASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dnmt3aO88508 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Dnmt3aO88508 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.38□□□□□ -0.11
Dnmt3aO88508 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Gm13015-201ENSMUST00000118674 204 ntBASIC14.37□□□□□ -0.11
Dnmt3aO88508 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.37□□□□□ -0.11
Dnmt3aO88508 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Dnmt3aO88508 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms