Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.21□□□□□ -0.29
Tnfrsf17O88472 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfrsf17O88472 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfrsf17O88472 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Gm22331-201ENSMUST00000158066 136 ntBASIC13.2□□□□□ -0.3
Tnfrsf17O88472 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Mir433-201ENSMUST00000093564 124 ntBASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfrsf17O88472 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gm15240-201ENSMUST00000118156 720 ntBASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.19□□□□□ -0.3
Tnfrsf17O88472 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms