Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.7□□□□□ -0.38
Col5a1O88207 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col5a1O88207 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col5a1O88207 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.7□□□□□ -0.38
Col5a1O88207 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Col5a1O88207 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col5a1O88207 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Col5a1O88207 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col5a1O88207 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col5a1O88207 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col5a1O88207 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col5a1O88207 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.69□□□□□ -0.38
Col5a1O88207 Gm27847-201ENSMUST00000183711 107 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Gm27375-201ENSMUST00000183799 107 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Col5a1O88207 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col5a1O88207 Gm11803-201ENSMUST00000119966 444 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.69□□□□□ -0.38
Col5a1O88207 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.69□□□□□ -0.38
Col5a1O88207 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col5a1O88207 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col5a1O88207 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.69□□□□□ -0.38
Col5a1O88207 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col5a1O88207 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.68□□□□□ -0.38
Col5a1O88207 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.68□□□□□ -0.38
Col5a1O88207 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Col5a1O88207 Gm38002-201ENSMUST00000193255 180 ntBASIC12.68□□□□□ -0.38
Col5a1O88207 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.68□□□□□ -0.38
Col5a1O88207 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.68□□□□□ -0.38
Col5a1O88207 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col5a1O88207 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col5a1O88207 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.67□□□□□ -0.38
Col5a1O88207 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.67□□□□□ -0.38
Col5a1O88207 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms