Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.86□□□□□ -0.03
Ttc3O88196 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ttc3O88196 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ttc3O88196 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Gm13689-201ENSMUST00000119360 685 ntBASIC14.85□□□□□ -0.03
Ttc3O88196 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.85□□□□□ -0.03
Ttc3O88196 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Ttc3O88196 Gm9002-201ENSMUST00000178437 499 ntBASIC14.85□□□□□ -0.03
Ttc3O88196 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.85□□□□□ -0.03
Ttc3O88196 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ttc3O88196 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ttc3O88196 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ttc3O88196 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ttc3O88196 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Gm5356-201ENSMUST00000093326 615 ntBASIC14.85□□□□□ -0.03
Ttc3O88196 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ttc3O88196 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm13385-201ENSMUST00000121089 220 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm43094-201ENSMUST00000196549 921 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ttc3O88196 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ttc3O88196 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ttc3O88196 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ttc3O88196 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.84□□□□□ -0.03
Ttc3O88196 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
Ttc3O88196 Gm27892-201ENSMUST00000185017 106 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Gm44719-201ENSMUST00000206404 149 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Gm18307-201ENSMUST00000206864 949 ntBASIC14.84□□□□□ -0.03
Ttc3O88196 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.84□□□□□ -0.03
Ttc3O88196 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ttc3O88196 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ttc3O88196 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ttc3O88196 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ttc3O88196 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ttc3O88196 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ttc3O88196 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ttc3O88196 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ttc3O88196 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms