Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cxcl13O55038 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcl13O55038 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.07□□□□□ -0.48
Cxcl13O55038 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Cxcl13O55038 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Gm10766-202ENSMUST00000194123 606 ntBASIC12.06□□□□□ -0.48
Cxcl13O55038 Gm44608-201ENSMUST00000206827 855 ntBASIC12.06□□□□□ -0.48
Cxcl13O55038 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.06□□□□□ -0.48
Cxcl13O55038 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcl13O55038 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.05□□□□□ -0.48
Cxcl13O55038 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.05□□□□□ -0.48
Cxcl13O55038 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcl13O55038 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcl13O55038 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm14928-201ENSMUST00000120198 477 ntBASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm4804-201ENSMUST00000182234 999 ntBASIC12.04□□□□□ -0.48
Cxcl13O55038 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm28631-201ENSMUST00000190740 334 ntBASIC12.04□□□□□ -0.48
Cxcl13O55038 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl13O55038 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Cxcl13O55038 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cxcl13O55038 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.04□□□□□ -0.48
Cxcl13O55038 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms