Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Gm15460-201ENSMUST00000118147 391 ntBASIC15.72■□□□□ 0.11
Sptlc1O35704 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Gm8515-201ENSMUST00000194852 576 ntBASIC15.72■□□□□ 0.11
Sptlc1O35704 Gm18018-201ENSMUST00000198273 408 ntBASIC15.72■□□□□ 0.11
Sptlc1O35704 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.72■□□□□ 0.11
Sptlc1O35704 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.72■□□□□ 0.11
Sptlc1O35704 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.72■□□□□ 0.11
Sptlc1O35704 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Sptlc1O35704 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sptlc1O35704 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sptlc1O35704 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sptlc1O35704 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Gm12585-201ENSMUST00000117307 290 ntBASIC15.71■□□□□ 0.11
Sptlc1O35704 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.71■□□□□ 0.11
Sptlc1O35704 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 AC125539.1-201ENSMUST00000227423 622 ntBASIC15.71■□□□□ 0.11
Sptlc1O35704 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sptlc1O35704 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sptlc1O35704 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sptlc1O35704 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sptlc1O35704 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sptlc1O35704 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sptlc1O35704 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.7■□□□□ 0.1
Sptlc1O35704 Gm37917-201ENSMUST00000194711 392 ntBASIC15.7■□□□□ 0.1
Sptlc1O35704 Gm9908-201ENSMUST00000211534 448 ntBASIC15.7■□□□□ 0.1
Sptlc1O35704 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sptlc1O35704 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.7■□□□□ 0.1
Sptlc1O35704 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.69■□□□□ 0.1
Sptlc1O35704 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC15.69■□□□□ 0.1
Sptlc1O35704 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.69■□□□□ 0.1
Sptlc1O35704 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Sptlc1O35704 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sptlc1O35704 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.69■□□□□ 0.1
Sptlc1O35704 Gm43452-201ENSMUST00000201873 991 ntBASIC15.69■□□□□ 0.1
Sptlc1O35704 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.69■□□□□ 0.1
Sptlc1O35704 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.69■□□□□ 0.1
Sptlc1O35704 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms