Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.34■□□□□ 0.05
Nr1i3O35627 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.34■□□□□ 0.05
Nr1i3O35627 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nr1i3O35627 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1i3O35627 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1i3O35627 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1i3O35627 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1i3O35627 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.33■□□□□ 0.05
Nr1i3O35627 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nr1i3O35627 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
Nr1i3O35627 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Nr1i3O35627 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Nr1i3O35627 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.33■□□□□ 0.04
Nr1i3O35627 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Gm12260-201ENSMUST00000122447 411 ntBASIC15.33■□□□□ 0.04
Nr1i3O35627 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.33■□□□□ 0.04
Nr1i3O35627 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.33■□□□□ 0.04
Nr1i3O35627 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.33■□□□□ 0.04
Nr1i3O35627 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nr1i3O35627 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Nr1i3O35627 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.32■□□□□ 0.04
Nr1i3O35627 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.32■□□□□ 0.04
Nr1i3O35627 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nr1i3O35627 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nr1i3O35627 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.31■□□□□ 0.04
Nr1i3O35627 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nr1i3O35627 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nr1i3O35627 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms